Skip to main content

Jane Richardson, Trying New Things

These two weeks, I decided to keep myself open to new opportunities so I could get the most out of your lab experience. Though I have been working primarily with SERT in staining slides, I got to try several new things this week that I am really excited about. First of all, I began working with another protein (tryptophan hydroxylase) that produce 5-HTT in an attempt to explain the high levels of serotonin in Giardiasis and IBS. One interesting thing that came from this slide production was that though SERT levels are higher on the outside of the intestine, trp levels are found to be higher on the inside of the intestine. This was very surprising to me because I assumed the reverse would be true. As for my continued work with SERT, levels in the distal colon still seem to remain higher than any part of the small intestine. This was an unexpected result that we first thought was a fluke, but now is presenting itself more and more. We will continue to look into that as we keep analyzing the slides.

Another interesting thing we did this week was making media for the Giardia parasites we are growing. Media is a substance that the Giardia is grown in so it can flourish and be used for research purposes. You add a wide array of things to the media, some I expected and some I did not. For example, you have to add a wide array of antioxidants because Giardia grows best when it is not in the presence of oxygen. I had not read this before in any of my research and was really surprised by what I learned. This also meant you had to be extremely careful when handling the media to avoid the formation of bubbles. It was really cool to make media and work with the parasite.

Lastly, I was able to observe a bone marrow extraction from a mouse in the animal facility. This was really interesting. We made media specifically for immune cells and use a syringe to flush the bones. When we had removed the bone marrow, I got to do the cell cultures. From this bone marrow, we are able to research the naive immune cells inside them. These immune cells are extremely important to some of the research projects in the lab. I was really excited to be a part of this crucial research.

Overall, these two weeks have been great! I got to try a lot of new things in the lab that I never imagined I would be able to do! As for outside of work, I have been having a great time in D.C. Even though I live in Arlington, there are still so many things I have never seen before and I love being able to explore them. For example, I was able to go to the portrait gallery and see the massive portraits of the Obamas, which was incredible! I also went to a park near Reagan National with some of my friends and watched the planes fly right over our heads!

Comments

Popular posts from this blog

Kylie Heering, Week 2 at the Goldstein Lab

We started off our week with a congratulatory acai bowl trip to celebrate Preston’s acceptance into a training grant program. Acai bowls in California top Playa Bowls (no question about it). From what I can tell, its a pretty huge honor to be recognized by this grant, but he’s really humble about it. On Monday, Preston and I decided that testing antibodies that have never been tested on prostate epithelial cells before would be a good objective for my first Western blot on my own. We needed to probe for ASCT2, a glutamine transporter, and GLS in order to determine if their corresponding antibodies are functional. Antibodies are crucial for Western blots because they bind to the protein of interest (POI), allowing for us to qualify its expression after imaging. As such, Preston wanted to make sure they worked by probing for ASCT2 and GLS on three different cell lines. Cell lines are commercially purchased human cells that have been immortalized (modified to grow indefinitely) by telome...

Alan - First Week at UCSF

Hi Everyone! After arriving in San Francisco last Sunday, I spent this past week settling into the downtown Berkeley apartment that I’ll be sharing with Rohit for the next couple of months, as well as learning my way around the Roy lab at UCSF. First day at the lab was really exciting. Here are a couple pictures of the Mission Bay campus, which was completed just a few years ago. Everything is super new and modern, and there’s still construction for other buildings going on around the campus. Most of the people who work at the Mission Bay campus are either professional researchers or doctors/nurses for the nearby hospital. The graduate students take most of their classes at the original Parnassus campus (where Maya is). I work in Byers Hall, which is connected to Genentech Hall and a short walk down the block from the shuttle stop. There are three other volunteers working for the Roy lab this summer – Kimmai, David, and Pujita, who are all undergrad college students...

Jaewon Oh - Week 7 and 8

Finally done here with my experience and I wish I had more time keep researching so that I have something a little more "finalised" to present. But I guess that's what past EXP kids meant when they said that 8 weeks of research is not enough and I'll have to work with what I've got. To solve the problem of not having enough data points, we used the online TCGA database for raw data that would be used to calculate mutation rates. Mutation rates were calculated through an R coding script that Dr. Cannataro had made. Because the mutation rates were tumor specific, we had to change the proportions that were obtained from the IARC database using data from another database called cBioPortal. Basically we had to multiply the number of times a certain variant was seen in the IARC database by the percentage of tumors that have a tp53 mutation, because our mutation rates are calculated across all tumors in specific cancers (confusing, I know). After graphing the mutatio...